Research Output

Article

A comprehensive survey of human polymorphisms at conserved splice dinucleotides and its evolutionary relationship with alternative splicing

Shimada, M. K., Hayakawa, Y., Takeda, J. I., Gojobori, T. & Imanishi, T., 03-05-2010, In : BMC Evolutionary Biology. 10, 1, 122.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Activation of pre-mRNA splicing by human RNPS1 is regulated by CK2 phosphorylation

Trembley, J. H., Tatsumi, S., Sakashita, E., Loyer, P., Slaughter, C. A., Suzuki, H., Endo, H., Kidd, V. J. & Mayeda, A., 01-02-2005, In : Molecular and Cellular Biology. 25, 4, p. 1446-1457 12 p.

Research output: Contribution to journalArticle

27 Citations (Scopus)

Allele frequency distribution of the canine dopamine receptor D4 gene exon III and I in 23 breeds

Ito, H., Nara, H., Inoue-Murayama, M., Shimada, M. K., Koshimura, A., Ueda, Y., Kitagawa, H., Takeuchi, Y., Mori, Y., Murayama, Y., Morita, M., Iwasaki, T., Ôta, K., Tanabe, Y. & Ito, S., 01-07-2004, In : Journal of Veterinary Medical Science. 66, 7, p. 815-820 6 p.

Research output: Contribution to journalArticle

58 Citations (Scopus)
11 Citations (Scopus)

A novel rat orthologue and homologue for the Drosophila crooked neck gene in neural stem cells and their immediate descendants

Amada, N., Tezuka, T., Mayeda, A., Araki, K., Takei, N., Todokoro, K. & Nawa, H., 01-05-2003, In : Journal of Biochemistry. 133, 5, p. 615-623 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
Open Access
1 Citation (Scopus)

CDK11 complexes promote pre-mRNA splicing

Hu, D., Mayeda, A., Trembley, J. H., Lahti, J. M. & Kidd, V. J., 07-03-2003, In : Journal of Biological Chemistry. 278, 10, p. 8623-8629 7 p.

Research output: Contribution to journalArticle

97 Citations (Scopus)

Characterization of a SR protein from Trypanosoma brucei with homology to RNA-binding cis-splicing proteins

Ismaïli, N., Pérez-Morga, D., Walsh, P., Mayeda, A., Pays, A., Tebabi, P., Krainer, A. R. & Pays, E., 30-07-1999, In : Molecular and Biochemical Parasitology. 102, 1, p. 103-115 13 p.

Research output: Contribution to journalArticle

30 Citations (Scopus)

Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing

Suzuki, H., Zuo, Y., Wang, J., Zhang, M. Q., Malhotra, A. & Mayeda, A., 10-07-2006, In : Nucleic Acids Research. 34, 8, e63.

Research output: Contribution to journalArticle

235 Citations (Scopus)

Characterization of Two Evolutionarily Conserved, Alternatively Spliced Nuclear Phosphoproteins, NFAR-1 and -2, that Function in mRNA Processing and Interact with the Double-stranded RNA-dependent Protein Kinase, PKR

Saunders, L. R., Perkins, D. J., Balachandran, S., Michaels, R., Ford, R., Mayeda, A. & Barber, G. N., 24-08-2001, In : Journal of Biological Chemistry. 276, 34, p. 32300-32312 13 p.

Research output: Contribution to journalArticle

102 Citations (Scopus)

Competition between a noncoding exon and introns: Gomafu contains tandem UACUAAC repeats and associates with splicing factor-1

Tsuiji, H., Yoshimoto, R., Hasegawa, Y., Furuno, M., Yoshida, M. & Nakagawa, S., 01-05-2011, In : Genes to Cells. 16, 5, p. 479-490 12 p.

Research output: Contribution to journalArticle

91 Citations (Scopus)

Component of splicing factor SF3b plays a key role in translational control of polyribosomes on the endoplasmic reticulum

Ueno, T., Taga, Y., Yoshimoto, R., Mayeda, A., Hattori, S. & Ogawa-Goto, K., 07-05-2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 19, p. 9340-9349 10 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Control of the heat stress-induced alternative splicing of a subset of genes by hnRNP K

Yamamoto, K., Furukawa, M. T., Fukumura, K., Kawamura, A., Yamada, T., Suzuki, H., Hirose, T., Sakamoto, H. & Inoue, K., 01-09-2016, In : Genes to Cells. 21, 9, p. 1006-1014 9 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

Crystallization and preliminary X-ray diffraction studies of UP1, the two-RRM domain of hnRNP A1

Jokhan, L., Dong, A. P., Mayeda, A., Krainer, A. R. & Xu, R. M., 01-01-1997, In : Acta Crystallographica Section D: Biological Crystallography. 53, 5, p. 615-618 4 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Crystal structure of human UP1, the domain of hnRNP A1 that contains two RNA-recognition motifs

Xu, R. M., Jokhan, L., Cheng, X., Mayeda, A. & Krainer, A. R., 01-01-1997, In : Structure. 5, 4, p. 559-570 12 p.

Research output: Contribution to journalArticle

91 Citations (Scopus)

Decrease in hnRNP A/B expression during erythropoiesis mediates a pre-mRNA splicing switch

Hou, V. C., Lersch, R., Gee, S. L., Ponthier, J. L., Lo, A. J., Wu, M., Turck, C. W., Koury, M., Krainer, A. R., Mayeda, A. & Conboy, J. G., 15-11-2002, In : EMBO Journal. 21, 22, p. 6195-6204 10 p.

Research output: Contribution to journalArticle

54 Citations (Scopus)

Detection of pre-mRNA splicing in vitro by an RNA-templated fluorogenic reaction

Tamura, Y., Furukawa, K., Yoshimoto, R., Kawai, Y., Yoshida, M., Tsuneda, S., Ito, Y. & Abe, H., 01-12-2012, In : Bioorganic and Medicinal Chemistry Letters. 22, 23, p. 7248-7251 4 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Differential expression of plexin-A subfamily members in the mouse nervous system

Murakami, Y., Suto, F., Shimizu, M., Shinoda, T., Kameyama, T. & Fujisawa, H., 06-03-2001, In : Developmental Dynamics. 220, 3, p. 246-258 13 p.

Research output: Contribution to journalArticle

91 Citations (Scopus)

Disruption of pre-mRNA splicing in vivo results in reorganization of splicing factors

O'Keefe, R. T., Mayeda, A., Sadowski, C. L., Krainer, A. R. & Spector, D. L., 02-1994, In : Journal of Cell Biology. 124, 3, p. 249-260 12 p.

Research output: Contribution to journalArticle

146 Citations (Scopus)

Distinct functions of the closely related tandem RNA-recognition motifs of hnRNP A1

Mayeda, A., Munroe, S. H., Xu, R. M. & Krainer, A. R., 01-09-1998, In : RNA. 4, 9, p. 1111-1123 13 p.

Research output: Contribution to journalArticle

40 Citations (Scopus)

Distribution and effects of nonsense polymorphisms in human genes

Yamaguchi-Kabata, Y., Shimada, M. K., Hayakawa, Y., Minoshima, S., Chakraborty, R., Gojobori, T. & Imanishi, T., 14-10-2008, In : PloS one. 3, 10, e3393.

Research output: Contribution to journalArticle

31 Citations (Scopus)

Divergent haplotypes and human history as revealed in a worldwide survey of X-linked DNA sequence variation

Shimada, M. K., Panchapakesan, K., Tishkoff, S. A., Nato, A. Q. & Hey, J., 01-03-2007, In : Molecular Biology and Evolution. 24, 3, p. 687-698 12 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Endogenous multiple exon skipping and back-splicing at the DMD mutation hotspot

Suzuki, H., Aoki, Y., Kameyama, T., Saito, T., Masuda, S., Tanihata, J., Nagata, T., Mayeda, A., Takeda, SI. & Tsukahara, T., 13-10-2016, In : International journal of molecular sciences. 17, 10, 1722.

Research output: Contribution to journalArticle

20 Citations (Scopus)

ETV6-LPXN fusion transcript generated by t(11;12)(q12.1;p13) in a patient with relapsing acute myeloid leukemia with NUP98-HOXA9

Abe, A., Yamamoto, Y., Iba, S., Kanie, T., Okamoto, A., Tokuda, M., Inaguma, Y., Yanada, M., Morishima, S., Mizuta, S., Akatsuka, Y., Okamoto, M., Kameyama, T., Mayeda, A. & Emi, N., 01-03-2016, In : Genes Chromosomes and Cancer. 55, 3, p. 242-250 9 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Evidence for the function of an exonic splicing enhancer after the first catalytic step of pre-mRNA splicing

Chew, S. L., Liu, H. X., Mayeda, A. & Krainer, A. R., 14-09-1999, In : Proceedings of the National Academy of Sciences of the United States of America. 96, 19, p. 10655-10660 6 p.

Research output: Contribution to journalArticle

45 Citations (Scopus)
32 Citations (Scopus)

Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins

Zhu, J., Mayeda, A. & Krainer, A. R., 01-01-2001, In : Molecular Cell. 8, 6, p. 1351-1361 11 p.

Research output: Contribution to journalArticle

267 Citations (Scopus)

Fluorescence detection of intron lariat RNA with reduction-triggered fluorescent probes

Furukawa, K., Abe, H., Tamura, Y., Yoshimoto, R., Yoshida, M., Tsuneda, S. & Ito, Y., 09-12-2011, In : Angewandte Chemie - International Edition. 50, 50, p. 12020-12023 4 p.

Research output: Contribution to journalArticle

24 Citations (Scopus)

Fluvoxamine moderates reduced voluntary activity following chronic dexamethasone infusion in mice via recovery of BDNF signal cascades

Terada, K., Izumo, N., Suzuki, B., Karube, Y., Morikawa, T., Ishibashi, Y., Kameyama, T., Chiba, K., Sasaki, N., Iwata, K., Matsuzaki, H. & Manabe, T., 01-01-2014, In : Neurochemistry International. 69, 1, p. 9-13 5 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Fluvoxamine reverses estrogen-dependent decline in voluntary activities and decreased amygdala levels of serotonin in ovariectomized rats

Lshibashi, Y., Lzumo, N., Lwata, K., Morikawa, T., Kameyama, T., Watanabe, Y., Manabe, T. & Matsuzaki, H., 30-06-2016, In : Journal of Brain Science. 46, p. 5-19 15 p.

Research output: Contribution to journalArticle

Functional expression of cloned human splicing factor SF2: homology to rna-binding proteins, U1 70K, and drosophila splicing regulators

Krainer, A. R., Mayeda, A., Kozak, D. & Binns, G., 26-07-1991, In : Cell. 66, 2, p. 383-394 12 p.

Research output: Contribution to journalArticle

378 Citations (Scopus)

Function of a cell adhesion molecule, plexin, in neuron network formation

Fujisawa, H., Ohta, K., Kameyama, T. & Murakami, Y., 01-01-1997, In : Developmental Neuroscience. 19, 1, p. 101-105 5 p.

Research output: Contribution to journalArticle

18 Citations (Scopus)

General splicing factor SF2/ASF promotes alternative splicing by binding to an exonic splicing enhancer

Sun, Q., Mayeda, A., Hampson, R. K., Krainer, A. R. & Rottman, F. M., 01-12-1993, In : Genes and Development. 7, 12 B, p. 2598-2608 11 p.

Research output: Contribution to journalArticle

235 Citations (Scopus)
184 Citations (Scopus)
10 Citations (Scopus)
12 Citations (Scopus)

Global analysis of pre-mRNA subcellular localization following splicing inhibition by spliceostatin A

Yoshimoto, R., Kaida, D., Furuno, M., Burroughs, A. M., Noma, S., Suzuki, H., Kawamura, Y., Hayashizaki, Y., Mayeda, A. & Yoshida, M., 01-2017, In : RNA. 23, 1, p. 47-57 11 p.

Research output: Contribution to journalArticle

19 Citations (Scopus)

High prevalence of simian T-lymphotropic virus type L in wild Ethiopian baboons

Takemura, T., Yamashita, M., Shimada, M. K., Ohkura, S., Shotake, T., Ikeda, M., Miura, T. & Hayami, M., 05-02-2002, In : Journal of Virology. 76, 4, p. 1642-1648 7 p.

Research output: Contribution to journalArticle

36 Citations (Scopus)

HMGA1a: Sequence-specific RNA-binding factor causing sporadic Alzheimer's disease-linked exon skipping of presenilin-2 pre-mRNA

Manabe, T., Ohe, K., Katayama, T., Matsuzaki, S., Yanagita, T., Okuda, H., Bando, Y., Imaizumi, K., Reeves, R., Tohyama, M. & Mayeda, A., 01-10-2007, In : Genes to Cells. 12, 10, p. 1179-1191 13 p.

Research output: Contribution to journalArticle

23 Citations (Scopus)

HMGA1a induces alternative splicing of estrogen receptor alpha in MCF-7 human breast cancer cells

Ohe, K., Miyajima, S., Abe, I., Tanaka, T., Hamaguchi, Y., Harada, Y., Horita, Y., Beppu, Y., Ito, F., Yamasaki, T., Terai, H., Mori, M., Murata, Y., Tanabe, M., Ashida, K., Kobayashi, K., Enjoji, M., Yanase, T., Harada, N., Utsumi, T. & 1 others, Mayeda, A., 09-2018, In : Journal of Steroid Biochemistry and Molecular Biology. 182, p. 21-26 6 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

HMGA1a induces alternative splicing of the estrogen receptor-alpha gene by trapping U1 snRNP to an upstream pseudo-5' splice site

Ohe, K., Miyajima, S., Tanaka, T., Hamaguchi, Y., Harada, Y., Horita, Y., Beppu, Y., Ito, F., Yamasaki, T., Terai, H., Mori, M., Murata, Y., Tanabe, M., Abe, I., Ashida, K., Kobayashi, K., Enjoji, M., Nomiyama, T., Yanase, T., Harada, N. & 2 others, Utsumi, T. & Mayeda, A., 08-06-2018, In : Frontiers in Molecular Biosciences. 5, JUN, 52.

Research output: Contribution to journalArticle

2 Citations (Scopus)
25 Citations (Scopus)

hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing

Caputi, M., Mayeda, A., Krainer, A. R. & Zahler, A. M., 15-07-1999, In : EMBO Journal. 18, 14, p. 4060-4067 8 p.

Research output: Contribution to journalArticle

217 Citations (Scopus)

HnRNP L and hnRNP LL antagonistically modulate PTB-mediated splicing suppression of CHRNA1 pre-mRNA

Rahman, M. A., Masuda, A., Ohe, K., Ito, M., Hutchinson, D. O., Mayeda, A., Engel, A. G. & Ohno, K., 25-10-2013, In : Scientific reports. 3, 2931.

Research output: Contribution to journalArticle

22 Citations (Scopus)

Human Immunodeficiency Virus Type 1 hnRNP A/B-Dependent Exonic Splicing Silencer ESSV Antagonizes Binding of U2AF65 to Viral Polypyrimidine Tracts

Domsic, J. K., Wang, Y., Mayeda, A., Krainer, A. R. & Stoltzfus, C. M., 01-12-2003, In : Molecular and Cellular Biology. 23, 23, p. 8762-8772 11 p.

Research output: Contribution to journalArticle

51 Citations (Scopus)

Human RNPS1 and Its Associated Factors: A Versatile Alternative Pre-mRNA Splicing Regulator in Vivo

Sakashita, E., Tatsumi, S., Werner, D., Endo, H. & Mayeda, A., 01-02-2004, In : Molecular and Cellular Biology. 24, 3, p. 1174-1187 14 p.

Research output: Contribution to journalArticle

73 Citations (Scopus)

Identification and validation of evolutionarily conserved unusually short pre-mRNA introns in the human genome

Shimada, M. K., Sasaki-Haraguchi, N. & Mayeda, A., 07-05-2015, In : International journal of molecular sciences. 16, 5, p. 10376-10388 13 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Identification of a neuronal cell surface molecule, plexin, in mice

Kameyama, T., Murakami, Y., Suto, F., Kawakami, A., Takagi, S., Hirata, T. & Fujisawa, H., 13-09-1996, In : Biochemical and Biophysical Research Communications. 226, 2, p. 524-529 6 p.

Research output: Contribution to journalArticle

32 Citations (Scopus)

Identification of a novel component C2ORF3 in the lariat-intron complex: Lack of C2ORF3 interferes with pre-mRNA splicing via intron turnover pathway

Yoshimoto, R., Okawa, K., Yoshida, M., Ohno, M. & Kataoka, N., 01-01-2014, In : Genes to Cells. 19, 1, p. 78-87 10 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Identification of cis- and trans-acting factors involved in the localization of MALAT-1 noncoding RNA to nuclear speckles

Miyagawa, R., Tano, K., Mizuno, R. I. E., Nakamura, Y. O., Ijiri, K., Rakwal, R., Shibato, J., Masuo, Y., Mayeda, A., Hirose, T. & Akimitsu, N., 01-04-2012, In : RNA. 18, 4, p. 738-751 14 p.

Research output: Contribution to journalArticle

119 Citations (Scopus)