Research Output 1984 2019

2007
33 Citations (Scopus)

Tissue-specific splicing regulator Fox-1 induces exon skipping by interfering E complex formation on the downstream intron of human F1γ gene

Fukumura, K., Kato, A., Jin, Y., Ideue, T., Hirose, T., Kataoka, N., Fujiwara, T., Sakamoto, H. & Inoue, K., 01-08-2007, In : Nucleic Acids Research. 35, 16, p. 5303-5311 9 p.

Research output: Contribution to journalArticle

Introns
Exons
Genes
RNA-Binding Proteins
RNA Precursors
2006
218 Citations (Scopus)

Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing

Suzuki, H., Zuo, Y., Wang, J., Zhang, M. Q., Malhotra, A. & Mayeda, A., 10-07-2006, In : Nucleic Acids Research. 34, 8, e63.

Research output: Contribution to journalArticle

RNA Precursors
RNA
Introns
Trans-Splicing
Alternative Splicing
45 Citations (Scopus)

Thr199 phosphorylation targets nucleophosmin to nuclear speckles and represses pre-mRNA processing

Tarapore, P., Shinmura, K., Suzuki, H., Tokuyama, Y., Kim, S. H., Mayeda, A. & Fukasawa, K., 23-01-2006, In : FEBS Letters. 580, 2, p. 399-409 11 p.

Research output: Contribution to journalArticle

Phosphorylation
RNA Precursors
Speckle
Processing
Cyclin A
2005
26 Citations (Scopus)

Activation of pre-mRNA splicing by human RNPS1 is regulated by CK2 phosphorylation

Trembley, J. H., Tatsumi, S., Sakashita, E., Loyer, P., Slaughter, C. A., Suzuki, H., Endo, H., Kidd, V. J. & Mayeda, A., 01-02-2005, In : Molecular and Cellular Biology. 25, 4, p. 1446-1457 12 p.

Research output: Contribution to journalArticle

RNA Precursors
Phosphorylation
Serine
Exons
Protein Splicing
16 Citations (Scopus)

Nucleotide sequence comparison of a chromosome rearrangement on human chromosome 12 and the corresponding ape chromosomes

Shimada, M., Kim, C. G., Kitano, T., Ferrell, R. E., Kohara, Y. & Saitou, N., 01-01-2005, In : Cytogenetic and Genome Research. 108, 1-3, p. 83-90 8 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 12
Hominidae
Human Chromosomes
Genomic Segmental Duplications
Pan troglodytes
2004
57 Citations (Scopus)

Allele frequency distribution of the canine dopamine receptor D4 gene exon III and I in 23 breeds

Ito, H., Nara, H., Inoue-Murayama, M., Shimada, M. K., Koshimura, A., Ueda, Y., Kitagawa, H., Takeuchi, Y., Mori, Y., Murayama, Y., Morita, M., Iwasaki, T., Ôta, K., Tanabe, Y. & Ito, S., 01-07-2004, In : Journal of Veterinary Medical Science. 66, 7, p. 815-820 6 p.

Research output: Contribution to journalArticle

Dopamine D4 Receptors
Gene Frequency
exons
gene frequency
Canidae

Erratum: Human RNPS1 and Its Associated Factors: A Versatile Alternative Pre-mRNA Splicing Regulator In Vivo (Molecular and Cellular Biology (2004) 24, 3 (1174-1187))

Sakashita, E., Tatsumi, S., Werner, D., Endo, H. & Mayeda, A., 01-04-2004, In : Molecular and Cellular Biology. 24, 7, 1 p.

Research output: Contribution to journalComment/debate

RNA Precursors
Cell Biology
Molecular Biology
73 Citations (Scopus)

Human RNPS1 and Its Associated Factors: A Versatile Alternative Pre-mRNA Splicing Regulator in Vivo

Sakashita, E., Tatsumi, S., Werner, D., Endo, H. & Mayeda, A., 01-02-2004, In : Molecular and Cellular Biology. 24, 3, p. 1174-1187 14 p.

Research output: Contribution to journalArticle

RNA Precursors
Exons
Serine
U1 Small Nuclear Ribonucleoproteins
Proteins
10 Citations (Scopus)

Mitochondrial DNA genealogy of chimpanzees in the Nimba Mountains and Bossou, West Africa

Shimada, M. K., Hayakawa, S., Humle, T., Fujita, S., Hirata, S., Sugiyama, Y. & Saitou, N., 01-11-2004, In : American Journal of Primatology. 64, 3, p. 261-275 15 p.

Research output: Contribution to journalArticle

genealogy
Pan troglodytes
Western Africa
mitochondrial DNA
mountains
9 Citations (Scopus)

Polymorphism in the second intron of dopamine receptor D4 gene in humans and apes

Shimada, M. K., Inoue-Murayama, M., Ueda, Y., Maejima, M., Murayama, Y., Takenaka, O., Hayasaka, I. & Ito, S., 16-04-2004, In : Biochemical and Biophysical Research Communications. 316, 4, p. 1186-1190 5 p.

Research output: Contribution to journalArticle

Behavioral Sciences
Hominidae
Dopamine Receptors
Polymorphism
Introns
51 Citations (Scopus)

Tra2β, SF2/ASF and SRp30c modulate the function of an exonic splicing enhancer in exon 10 of tau pre-mRNA

Kondo, S., Yamamoto, N., Murakami, T., Okumura, M., Maeda, A. & Imaizumi, K., 01-02-2004, In : Genes to Cells. 9, 2, p. 121-130 10 p.

Research output: Contribution to journalArticle

RNA Precursors
Exons
Frontotemporal Dementia
Mutation
tau Proteins
2003
6 Citations (Scopus)

A novel rat orthologue and homologue for the Drosophila crooked neck gene in neural stem cells and their immediate descendants

Amada, N., Tezuka, T., Mayeda, A., Araki, K., Takei, N., Todokoro, K. & Nawa, H., 01-05-2003, In : Journal of Biochemistry. 133, 5, p. 615-623 9 p.

Research output: Contribution to journalArticle

Neural Stem Cells
Stem cells
Drosophila
Rats
Neck
90 Citations (Scopus)

CDK11 complexes promote pre-mRNA splicing

Hu, D., Maeda, A., Trembley, J. H., Lahti, J. M. & Kidd, V. J., 07-03-2003, In : Journal of Biological Chemistry. 278, 10, p. 8623-8629 7 p.

Research output: Contribution to journalArticle

RNA Precursors
Transcription
Protein Splicing
Phosphorylation
Proteins
32 Citations (Scopus)
Bovine papillomavirus 1
Phosphatidylinositol 3-Kinase
RNA Splice Sites
alternative splicing
phosphatidylinositol 3-kinase
50 Citations (Scopus)

Human Immunodeficiency Virus Type 1 hnRNP A/B-Dependent Exonic Splicing Silencer ESSV Antagonizes Binding of U2AF65 to Viral Polypyrimidine Tracts

Domsic, J. K., Wang, Y., Mayeda, A., Krainer, A. R. & Stoltzfus, C. M., 01-12-2003, In : Molecular and Cellular Biology. 23, 23, p. 8762-8772 11 p.

Research output: Contribution to journalArticle

Heterogeneous-Nuclear Ribonucleoproteins
RNA Splice Sites
HIV-1
Heterogeneous-Nuclear Ribonucleoprotein Group A-B
U1 Small Nuclear Ribonucleoproteins
50 Citations (Scopus)

Induced HMGA 1a expression causes aberrant splicing a Presenilin-2 pre-mRNA in sporadic Alzhiemer's disease

Manabe, T., Katayama, T., Sato, N., Gomi, F., Hitomi, J., Yanagita, T., Kudo, T., Honda, A., Mori, Y., Matsuzaki, S., Imaizumi, K., Mayeda, A. & Tohyama, M., 01-06-2003, In : Cell Death and Differentiation. 10, 6, p. 698-708 11 p.

Research output: Contribution to journalArticle

HMGA Proteins
Presenilin-2
RNA Precursors
Exons
U1 Small Nuclear Ribonucleoproteins

Pre-mRNA splicing: a source of a diversified gene expression network

Mayeda, A. & Suzuki, H., 03-2003, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 48, 4 Suppl, p. 404-413 10 p.

Research output: Contribution to journalReview article

RNA Splicing
RNA Splice Sites
RNA-Binding Proteins
Cell Nucleus Active Transport
Nonsense Codon
2002
54 Citations (Scopus)

Decrease in hnRNP A/B expression during erythropoiesis mediates a pre-mRNA splicing switch

Hou, V. C., Lersch, R., Gee, S. L., Ponthier, J. L., Lo, A. J., Wu, M., Turck, C. W., Koury, M., Krainer, A. R., Mayeda, A. & Conboy, J. G., 15-11-2002, In : EMBO Journal. 21, 22, p. 6195-6204 10 p.

Research output: Contribution to journalArticle

Heterogeneous-Nuclear Ribonucleoprotein Group A-B
Heterogeneous-Nuclear Ribonucleoproteins
Erythropoiesis
RNA Precursors
Exons
36 Citations (Scopus)

High prevalence of simian T-lymphotropic virus type L in wild Ethiopian baboons

Takemura, T., Yamashita, M., Shimada, M. K., Ohkura, S., Shotake, T., Ikeda, M., Miura, T. & Hayami, M., 05-02-2002, In : Journal of Virology. 76, 4, p. 1642-1648 7 p.

Research output: Contribution to journalArticle

Simian T-lymphotropic virus 3
T-Cell Leukemia
Papio
leukemia
T-lymphocytes
6 Citations (Scopus)

Mitochondrial sequence diversity within a subspecies of savanna monkeys (Cercopithecus aethiops) is similar to that between subspecies

Shimada, M. K., Terao, K. & Shotake, T., 01-01-2002, In : Journal of Heredity. 93, 1, p. 9-18 10 p.

Research output: Contribution to journalArticle

Open Access
Cercopithecus aethiops
Mitochondrial DNA
Haplorhini
Cercopithecus
rRNA Genes
19 Citations (Scopus)
Zinc Fingers
Neurons
Peripheral Nervous System
Nervous System
Transcription Factors
2001
98 Citations (Scopus)

Characterization of Two Evolutionarily Conserved, Alternatively Spliced Nuclear Phosphoproteins, NFAR-1 and -2, that Function in mRNA Processing and Interact with the Double-stranded RNA-dependent Protein Kinase, PKR

Saunders, L. R., Perkins, D. J., Balachandran, S., Michaels, R., Ford, R., Mayeda, A. & Barber, G. N., 24-08-2001, In : Journal of Biological Chemistry. 276, 34, p. 32300-32312 13 p.

Research output: Contribution to journalArticle

eIF-2 Kinase
Double-Stranded RNA
Phosphoproteins
RNA Precursors
RNA-Binding Protein FUS
91 Citations (Scopus)

Differential expression of plexin-A subfamily members in the mouse nervous system

Murakami, Y., Suto, F., Shimizu, M., Shinoda, T., Kameyama, T. & Fujisawa, H., 06-03-2001, In : Developmental Dynamics. 220, 3, p. 246-258 13 p.

Research output: Contribution to journalArticle

Semaphorins
Nervous System
Sensory Receptor Cells
Neuropilins
Nerve Tissue
262 Citations (Scopus)

Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins

Zhu, J., Maeda, A. & Krainer, A. R., 01-01-2001, In : Molecular Cell. 8, 6, p. 1351-1361 11 p.

Research output: Contribution to journalArticle

Exons
Proteins
Transcriptional Silencer Elements
Heterogeneous-Nuclear Ribonucleoproteins
hnRNP A1
91 Citations (Scopus)

RNA splicing at human immunodeficiency virus type 1 3′ splice site A2 is regulated by binding of hnRNP A/B proteins to an exonic splicing silencer element

Bilodeau, P. S., Domsic, J. K., Maeda, A., Krainer, A. R. & Stoltzfus, C. M., 31-08-2001, In : Journal of Virology. 75, 18, p. 8487-8497 11 p.

Research output: Contribution to journalArticle

Heterogeneous-Nuclear Ribonucleoprotein Group A-B
Transcriptional Silencer Elements
RNA splicing
RNA Splicing
RNA Splice Sites
52 Citations (Scopus)

Serine-Arginine (SR) Protein-like Factors That Antagonize Authentic SR Proteins and Regulate Alternative Splicing

Cowper, A. E., Cáceres, J. F., Mayeda, A. & Screaton, G. R., 28-12-2001, In : Journal of Biological Chemistry. 276, 52, p. 48908-48914 7 p.

Research output: Contribution to journalArticle

Alternative Splicing
Serine
Arginine
RNA Splice Sites
Proteins
52 Citations (Scopus)

ZNF265 - A novel spliceosomal protein able to induce alternative splicing

Adams, D. J., Van Der Weyden, L., Mayeda, A., Stamm, S., Morris, B. J. & Rasko, J. E. J., 09-07-2001, In : Journal of Cell Biology. 154, 1, p. 25-32 8 p.

Research output: Contribution to journalArticle

Alternative Splicing
Serine
Arginine
RNA Precursors
Proteins
2000
12 Citations (Scopus)
Cercopithecus aethiops
Ethiopia
mitochondrial DNA
geographical distribution
haplotypes
23 Citations (Scopus)

Mapping the SF2/ASF binding sites in the bovine growth hormone exonic splicing enhancer

Dirksen, W. P., Li, X., Mayeda, A., Krainer, A. R. & Rottman, F. M., 15-09-2000, In : Journal of Biological Chemistry. 275, 37, p. 29170-29177 8 p.

Research output: Contribution to journalArticle

Introns
Binding Sites
Exons
Nucleotides
Oligoribonucleotides
136 Citations (Scopus)

Selection of alternative 5' splice sites: Role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1

Eperon, I. C., Makarova, O. V., Mayeda, A., Munroe, S. H., Caceres, J. F., Hayward, D. G. & Krainer, A. R., 11-11-2000, In : Molecular and Cellular Biology. 20, 22, p. 8303-8318 16 p.

Research output: Contribution to journalArticle

U1 Small Nuclear Ribonucleoproteins
RNA Splice Sites
RNA Precursors
hnRNP A1
Protein Splicing
1999
30 Citations (Scopus)

Characterization of a SR protein from Trypanosoma brucei with homology to RNA-binding cis-splicing proteins

Ismaïli, N., Pérez-Morga, D., Walsh, P., Maeda, A., Pays, A., Tebabi, P., Krainer, A. R. & Pays, E., 30-07-1999, In : Molecular and Biochemical Parasitology. 102, 1, p. 103-115 13 p.

Research output: Contribution to journalArticle

Trans-Splicing
Protein Splicing
Trypanosoma brucei brucei
Serine
Arginine
45 Citations (Scopus)

Evidence for the function of an exonic splicing enhancer after the first catalytic step of pre-mRNA splicing

Chew, S. L., Liu, H. X., Maeda, A. & Krainer, A. R., 14-09-1999, In : Proceedings of the National Academy of Sciences of the United States of America. 96, 19, p. 10655-10660 6 p.

Research output: Contribution to journalArticle

RNA Precursors
Alternative Splicing
Exons
Trans-Splicing
Ligation
215 Citations (Scopus)

hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing

Caputi, M., Mayeda, A., Krainer, A. R. & Zahler, A. M., 15-07-1999, In : EMBO Journal. 18, 14, p. 4060-4067 8 p.

Research output: Contribution to journalArticle

Heterogeneous-Nuclear Ribonucleoprotein Group A-B
RNA Precursors
Viruses
HIV-1
Exons
88 Citations (Scopus)

Preparation of HeLa cell nuclear and cytosolic S100 extracts for in vitro splicing.

Mayeda, A. & Krainer, A. R., 1999, In : Methods in molecular biology (Clifton, N.J.). 118, p. 309-314 6 p.

Research output: Contribution to journalArticle

RNA Splicing
RNA Precursors
Nuclear Proteins
Cell Extracts
Cell Nucleus
114 Citations (Scopus)

Purification and characterization of human RNPS1: A general activator of pre-mRNA splicing

Mayeda, A., Badolato, J., Kobayashi, R., Zhang, M. Q., Gardiner, E. M. & Krainer, A. R., 16-08-1999, In : EMBO Journal. 18, 16, p. 4560-4570 11 p.

Research output: Contribution to journalArticle

RNA Precursors
Purification
RNA Splice Sites
Baculoviridae
Alternative Splicing
118 Citations (Scopus)

Substrate specificities of SR proteins in constitutive splicing are determined by their RNA recognition motifs and composite pre-mRNA exonic elements

Mayeda, A., Screaton, G. R., Chandler, S. D., Fu, X. D. & Krainer, A. R., 03-1999, In : Molecular and Cellular Biology. 19, 3, p. 1853-1863 11 p.

Research output: Contribution to journalArticle

RNA Precursors
Substrate Specificity
Exons
Proteins
Immunoglobulin M
97 Citations (Scopus)

The subcellular localization of SF2/ASF is regulated by direct interaction with SR protein kinases (SRPKs)

Koizumi, J., Okamoto, Y., Onogi, H., Maeda, A., Krainer, A. R. & Hagiwara, M., 16-04-1999, In : Journal of Biological Chemistry. 274, 16, p. 11125-11131 7 p.

Research output: Contribution to journalArticle

Protein Kinases
Serine
Arginine
Phosphorylation
Phosphotransferases
1998
40 Citations (Scopus)

Distinct functions of the closely related tandem RNA-recognition motifs of hnRNP A1

Mayeda, A., Munroe, S. H., Xu, R. M. & Krainer, A. R., 01-09-1998, In : RNA. 4, 9, p. 1111-1123 13 p.

Research output: Contribution to journalArticle

Alternative Splicing
Glycine
Proteins
hnRNP A1
RNA Recognition Motif
1997
4 Citations (Scopus)

Crystallization and preliminary X-ray diffraction studies of UP1, the two-RRM domain of hnRNP A1

Jokhan, L., Dong, A. P., Mayeda, A., Krainer, A. R. & Xu, R. M., 01-01-1997, In : Acta Crystallographica Section D: Biological Crystallography. 53, 5, p. 615-618 4 p.

Research output: Contribution to journalArticle

Crystallization
X-Ray Diffraction
Diffraction
RNA
crystallization
91 Citations (Scopus)

Crystal structure of human UP1, the domain of hnRNP A1 that contains two RNA-recognition motifs

Xu, R. M., Jokhan, L., Cheng, X., Mayeda, A. & Krainer, A. R., 01-01-1997, In : Structure. 5, 4, p. 559-570 12 p.

Research output: Contribution to journalArticle

Heterogeneous-Nuclear Ribonucleoproteins
RNA
Proteins
RNA Splice Sites
RNA Recognition Motif
18 Citations (Scopus)

Function of a cell adhesion molecule, plexin, in neuron network formation

Fujisawa, H., Ohta, K., Kameyama, T. & Murakami, Y., 01-01-1997, In : Developmental Neuroscience. 19, 1, p. 101-105 5 p.

Research output: Contribution to journalArticle

Cell Adhesion Molecules
Neurons
Xenopus
Cysteine
Proto-Oncogene Proteins
10 Citations (Scopus)

Genetic variation of blood proteins within and between local populations of grivet monkey (Cercopithecus aethiops aethiops) in Central ethiopia

Shimada, M. & Shotake, T., 01-01-1997, In : Primates. 38, 4, p. 399-414 16 p.

Research output: Contribution to journalArticle

Cercopithecus aethiops
Ethiopia
blood proteins
monkeys
genetic variation
11 Citations (Scopus)

RCC1 and nuclear organization

Huang, S., Mayeda, A., Krainer, A. R. & Spector, D. L., 06-1997, In : Molecular Biology of the Cell. 8, 6, p. 1143-1157 15 p.

Research output: Contribution to journalArticle

Messenger RNA
Temperature
Electrons
Small Nuclear Ribonucleoproteins
RNA Precursors
79 Citations (Scopus)

RNA splicing specificity determined by the coordinated action of RNA recognition motifs in SR proteins

Chandler, S. D., Mayeda, A., Yeakley, J. M., Krainer, A. R. & Fu, X. D., 15-04-1997, In : Proceedings of the National Academy of Sciences of the United States of America. 94, 8, p. 3596-3601 6 p.

Research output: Contribution to journalArticle

RNA Splicing
Substrate Specificity
Proteins
RNA Precursors
RNA Recognition Motif
1996
32 Citations (Scopus)

Identification of a neuronal cell surface molecule, plexin, in mice

Kameyama, T., Murakami, Y., Suto, F., Kawakami, A., Takagi, S., Hirata, T. & Fujisawa, H., 13-09-1996, In : Biochemical and Biophysical Research Communications. 226, 2, p. 524-529 6 p.

Research output: Contribution to journalArticle

Molecules
Xenopus
Cysteine
Proteins
Proto-Oncogene Proteins c-met
37 Citations (Scopus)

Identification of plexin family molecules in mice

Kameyama, T., Murakami, Y., Suto, F., Kawakami, A., Takagi, S., Hirata, T. & Fujisawa, H., 13-09-1996, In : Biochemical and Biophysical Research Communications. 226, 2, p. 396-402 7 p.

Research output: Contribution to journalArticle

Molecules
Proteins
Complementary DNA
Amino Acid Motifs
plexin
72 Citations (Scopus)

Pre-mRNA splicing in plants: Characterization of Ser/Arg splicing factors

Lopato, S., Maeda, A., Krainer, A. R. & Barta, A., 02-04-1996, In : Proceedings of the National Academy of Sciences of the United States of America. 93, 7, p. 3074-3079 6 p.

Research output: Contribution to journalArticle

RNA Precursors
Plant Proteins
Proteins
Protein Splicing
Arabidopsis Proteins
1994
146 Citations (Scopus)

Disruption of pre-mRNA splicing in vivo results in reorganization of splicing factors

O'Keefe, R. T., Mayeda, A., Sadowski, C. L., Krainer, A. R. & Spector, D. L., 02-1994, In : Journal of Cell Biology. 124, 3, p. 249-260 12 p.

Research output: Contribution to journalArticle

RNA Precursors
Oligonucleotides
Microinjections
Antibodies
Normal Distribution
1993
Heterogeneous-Nuclear Ribonucleoproteins
RNA Precursors
Cell Biology
Molecular Biology
Exons
235 Citations (Scopus)

General splicing factor SF2/ASF promotes alternative splicing by binding to an exonic splicing enhancer

Sun, Q., Mayeda, A., Hampson, R. K., Krainer, A. R. & Rottman, F. M., 01-12-1993, In : Genes and Development. 7, 12 B, p. 2598-2608 11 p.

Research output: Contribution to journalArticle

Alternative Splicing
Introns
RNA Precursors
Exons
RNA Splicing Factors