Research Output

  • 2194 Citations
  • 23 h-Index
  • 86 Article
  • 7 Letter
  • 1 Short survey
  • 1 Review article
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Article
2020

Bordetella dermonecrotic toxin is a neurotropic virulence factor that uses Cav3.1 as the cell surface receptor

Teruya, S., Hiramatsu, Y., Nakamura, K., Fukui-Miyazaki, A., Tsukamoto, K., Shinoda, N., Motooka, D., Nakamura, S., Ishigaki, K., Shinzawa, N., Nishida, T., Sugihara, F., Maeda, Y. & Horiguchi, Y., 01-03-2020, In : mBio. 11, 2, e03146-19.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Characterization of blaCTX-M-27/F1:A2:b20 plasmids harbored by escherichia coli sequence type 131 sublineage C1/H30R isolates spreading among elderly japanese in nonacute-care settings

Matsuo, N., Nonogaki, R., Hayashi, M., Wachino, J. I., Suzuki, M., Arakawa, Y. & Kawamura, K., 05-2020, In : Antimicrobial agents and chemotherapy. 64, 5, e00202-20.

Research output: Contribution to journalArticle

Clinical characteristics of peripheral venous catheter-associated gram-negative bloodstream infection among patients with malignancy

Sasaki, T., Harada, S., Yamamoto, S., Ohkushi, D., Hayama, B., Takeda, K., Hoashi, K., Shiotani, J., Takehana, K. & Doi, Y., 01-01-2020, In : PloS one. 15, 1, e0228396.

Research output: Contribution to journalArticle

Open Access

Emergence of a Plasmid-Encoded Resistance-Nodulation-Division Efflux Pump Conferring Resistance to Multiple Drugs, Including Tigecycline, in Klebsiella pneumoniae

Lv, L., Wan, M., Wang, C., Gao, X., Yang, Q., Partridge, S. R., Wang, Y., Zong, Z., Doi, Y., Shen, J., Jia, P., Song, Q., Zhang, Q., Yang, J., Huang, X., Wang, M. & Liu, J. H., 03-03-2020, In : mBio. 11, 2

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

Epidemiology of carbapenem-resistant Enterobacteriaceae in hospitals of a large healthcare system in Miami, Florida from 2012 to 2016: Five years of experience with an internal registry

Jimenez, A., Trepka, M. J., Munoz-Price, L. S., Pekovic, V., Ibrahimou, B., Abbo, L. M., Martinez, O., Sposato, K., dePascale, D., Perez-Cardona, A., McElheny, C. L., Bachman, W. C., Fowler, E. L., Doi, Y. & Fennie, K., 01-01-2020, (Accepted/In press) In : American Journal of Infection Control.

Research output: Contribution to journalArticle

Fatal fulminant community-acquired pneumonia caused by hypervirulent Klebsiella pneumoniae K2-ST86: Case report

Yamamoto, H., Iijima, A., Kawamura, K., Matsuzawa, Y., Suzuki, M. & Arakawa, Y., 22-05-2020, In : Medicine. 99, 21, p. e20360

Research output: Contribution to journalArticle

Open Access

High-Level Carbapenem Resistance in OXA-232-Producing Raoultella ornithinolytica Triggered by Ertapenem Therapy

Iovleva, A., Mettus, R. T., McElheny, C. L., Griffith, M. P., Mustapha, M. M., William Pasculle, A., Shields, R. K., Cooper, V. S. & Doi, Y., 01-01-2020, In : Antimicrobial agents and chemotherapy. 64, 1, e01335-19.

Research output: Contribution to journalArticle

ORF-based binarized structure network analysis of plasmids (OSNAp), a novel approach to core gene-independent plasmid phylogeny

Suzuki, M., Doi, Y. & Arakawa, Y., 03-2020, In : Plasmid. 108, 102477.

Research output: Contribution to journalArticle

1 Citation (Scopus)
1 Citation (Scopus)

Predominance of methicillin-resistant Staphylococcus aureus SCCmec type II-CC5 and SCCmec type IV-CC1/CC8 among companion animal clinical isolates in Japan: Findings from phylogenetic comparison with human clinical isolates

Taniguchi, Y., Koide, S., Maeyama, Y., Tamai, K., Hayashi, W., Tanaka, H., Iimura, M., Suzuki, M., Nagano, Y., Arakawa, Y. & Nagano, N., 03-2020, In : Journal of Global Antimicrobial Resistance. 20, p. 253-259 7 p.

Research output: Contribution to journalArticle

Open Access

Single-tube multiplex polymerase chain reaction for the detection of genes encoding enterobacteriaceae carbapenemase

Watahiki, M., Kawahara, R., Suzuki, M., Aoki, M., Uchida, K., Matsumoto, Y., Kumagai, Y., Noda, M., Masuda, K., Fukuda, C., Harada, S., Senba, K., Suzuki, M., Matsui, M., Suzuki, S., Shibayama, K. & Shinomiya, H., 01-01-2020, In : Japanese journal of infectious diseases. 73, 2, p. 166-172 7 p.

Research output: Contribution to journalArticle

Open Access

The Pitt Bacteremia Score Predicts Mortality in Nonbacteremic Infections

Henderson, H., Luterbach, C. L., Cober, E., Richter, S. S., Salata, R. A., Kalayjian, R. C., Watkins, R. R., Doi, Y., Kaye, K. S., Evans, S., Fowler, V. G., Bonomo, R. A., Harris, A., Napravnik, S. & Van Duin, D., 15-04-2020, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 70, 9, p. 1826-1833 8 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Translocation domain of botulinum neurotoxin A subtype 2 potently induces entry into neuronal cells

Kohda, T., Tsukamoto, K., Torii, Y., Kozaki, S. & Mukamoto, M., 01-01-2020, (Accepted/In press) In : MICROBIOLOGY and IMMUNOLOGY.

Research output: Contribution to journalArticle

Unusual community-associated carbapenem-resistant Acinetobacter baumannii infection, Pennsylvania, USA

Yassin, M. H., Phan, T. & Doi, Y., 2020, In : IDCases. 21, e00851.

Research output: Contribution to journalArticle

Open Access
2019

Adjunctive therapy of intravenous colistin to intravenous tigecycline for adult patients with non-bacteremic post-surgical intra-abdominal infection due to carbapenem-resistant Acinetobacter baumannii

Chusri, S., Singkhamanan, K., Wanitsuwan, W., Suphasynth, Y., Kositpantawong, N., Panthuwong, S. & Doi, Y., 09-2019, In : Journal of Infection and Chemotherapy. 25, 9, p. 681-686 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

A prospective study of acinetobacter baumannii complex isolates and colistin susceptibility monitoring by mass spectrometry of microbial membrane glycolipids

Leung, L. M., McElheny, C. L., Gardner, F. M., Chandler, C. E., Bowler, S. L., Mettus, R. T., Spychala, C. N., Fowler, E. L., Opene, B. N. A., Myers, R. A., Goodlett, D. R., Doi, Y. & Ernst, R. K., 03-2019, In : Journal of clinical microbiology. 57, 3, e01100-18.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Clinical and molecular characteristics of klebsiella pneumoniae isolates causing bloodstream infections in Japan: Occurrence of hypervirulent infections in health care

Harada, S., Aoki, K., Yamamoto, S., Ishii, Y., Sekiya, N., Kurai, H., Furukawa, K., Doi, A., Tochitani, K., Kubo, K., Yamaguchi, Y., Narita, M., Kamiyama, S., Suzuki, J., Fukuchi, T., Gu, Y., Okinaka, K., Shiiki, S., Hayakawa, K., Tachikawa, N. & 7 others, Kasahara, K., Nakamura, T., Yokota, K., Komatsu, M., Takamiya, M., Tateda, K. & Doi, Y., 01-01-2019, In : Journal of clinical microbiology. 57, 11, e01206-19.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Evaluation of the accelerate pheno system for identification of acinetobacter clinical isolates and minocycline susceptibility testing

Bowler, S. L., Towne, J. W., Humphries, R. M. & Doi, Y., 03-2019, In : Journal of clinical microbiology. 57, 3, e01711-18.

Research output: Contribution to journalArticle

Fluoroquinolone Prophylaxis Selects for Meropenem-nonsusceptible Pseudomonas aeruginosa in Patients with Hematologic Malignancies and Hematopoietic Cell Transplant Recipients

Hakki, M., Humphries, R. M., Hemarajata, P., Tallman, G. B., Shields, R. K., Mettus, R. T., Doi, Y. & Lewis, J. S., 06-2019, In : Clinical Infectious Diseases. 68, 12, p. 2045-2052 8 p., ciy825.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Left ventricular assist device-associated endocarditis involving multiple clones of Staphylococcus aureus with distinct antimicrobial susceptibility patterns

Harada, S., Aoki, K., Okamoto, K., Kinoshita, O., Nawata, K., Ishii, Y., Tateda, K., Sasaki, M., Saga, T., Doi, Y., Yotsuyanagi, H., Moriya, K. & Ono, M., 07-2019, In : International Journal of Infectious Diseases. 84, p. 44-47 4 p.

Research output: Contribution to journalArticle

Open Access

Molecular Epidemiology of Ceftriaxone-Nonsusceptible Enterobacterales Isolates in an Academic Medical Center in the United States

Tamma, P. D., Sharara, S. L., Pana, Z. D., Amoah, J., Fisher, S. L., Tekle, T., Doi, Y. & Simner, P. J., 01-08-2019, In : Open Forum Infectious Diseases. 6, 8, ofz353.

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

Population-level transition of capsular polysaccharide types among sequence type 1 group B Streptococcus isolates with reduced penicillin susceptibility during a long-term hospital epidemic

Nagano, N., Koide, S., Hayashi, W., Taniguchi, Y., Tanaka, H., Maeyama, Y., Suzuki, M., Kimura, K., Arakawa, Y. & Nagano, Y., 03-2019, In : International Journal of Antimicrobial Agents. 53, 3, p. 203-210 8 p.

Research output: Contribution to journalArticle

Open Access
2 Citations (Scopus)

Reduced ceftazidime and ertapenem susceptibility due to production of OXA-2 in Klebsiella pneumoniae ST258

Iovleva, A., Mettus, R. T., McElheny, C. L., Mustapha, M. M., Van Tyne, D., Shields, R. K., Pasculle, A. W., Cooper, V. S. & Doi, Y., 01-08-2019, In : The Journal of antimicrobial chemotherapy. 74, 8, p. 2203-2208 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

The Role of Trimethoprim/Sulfamethoxazole in the Treatment of Infections Caused by Carbapenem-Resistant Enterobacteriaceae

Luterbach, C. L., Boshe, A., Henderson, H. I., Cober, E., Richter, S. S., Salata, R. A., Kalayjian, R. C., Watkins, R. R., Hujer, A. M., Hujer, K. M., Rudin, S. D., Domitrovic, T. N., Doi, Y., Kaye, K. S., Evans, S., Fowler, V. G., Bonomo, R. A. & Van Duin, D., 01-01-2019, In : Open Forum Infectious Diseases. 6, 1

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Treatment Options for Carbapenem-resistant Gram-negative Bacterial Infections

Doi, Y., 13-11-2019, In : Clinical Infectious Diseases. 69, p. S565-S575

Research output: Contribution to journalArticle

Open Access
10 Citations (Scopus)
2018

Analysis of the Binding of Aripiprazole to Human Serum Albumin: The Importance of a Chloro-Group in the Chemical Structure

Sakurama, K., Kawai, A., Tuan Giam Chuang, V., Kanamori, Y., Osa, M., Taguchi, K., Seo, H., Maruyama, T., Imoto, S., Yamasaki, K. & Otagiri, M., 22-10-2018, In : ACS Omega. 3, 10, p. 13790-13797 8 p.

Research output: Contribution to journalArticle

Open Access
4 Citations (Scopus)

Colistin Versus Ceftazidime-Avibactam in the Treatment of Infections Due to Carbapenem-Resistant Enterobacteriaceae

Van Duin, D., Lok, J. J., Earley, M., Cober, E., Richter, S. S., Perez, F., Salata, R. A., Kalayjian, R. C., Watkins, R. R., Doi, Y., Kaye, K. S., Fowler, V. G., Paterson, D. L., Bonomo, R. A. & Evans, S., 15-01-2018, In : Clinical Infectious Diseases. 66, 2, p. 163-171 9 p.

Research output: Contribution to journalArticle

147 Citations (Scopus)

Distribution and molecular characterization of Acinetobacter baumannii international clone II lineage in Japan

Matsui, M., Suzuki, M., Suzuki, M., Yatsuyanagi, J., Watahiki, M., Hiraki, Y., Kawano, F., Tsutsui, A., Shibayama, K. & Suzuki, S., 02-2018, In : Antimicrobial agents and chemotherapy. 62, 2, e02190-17.

Research output: Contribution to journalArticle

Open Access
11 Citations (Scopus)

Diversity among bla KPC-containing plasmids in Escherichia coli and other bacterial species isolated from the same patients

Hazen, T. H., Mettus, R., McElheny, C. L., Bowler, S. L., Nagaraj, S., Doi, Y. & Rasko, D. A., 01-12-2018, In : Scientific reports. 8, 1, 10291.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Draft genome sequences of blaKPC-containing Enterobacter aerogenes, Citrobacter freundii, and Citrobacter koseri strains

Hazen, T. H., Mettus, R. T., McElheny, C. L., Bowler, S. L., Doi, Y. & Rasko, D. A., 01-02-2018, In : Genome Announcements. 6, 8, e00035-18.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Frequency and mechanisms of spontaneous fosfomycin nonsusceptibility observed upon disk diffusion testing of Escherichia coli

Lucas, A. E., Ito, R., Mustapha, M. M., McElheny, C. L., Mettus, R. T., Bowler, S. L., Kantz, S. F., Pacey, M. P., Pasculle, A. W., Cooper, V. S. & Doi, Y., 01-2018, In : Journal of clinical microbiology. 56, 1, e01368.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Genetic shifts in methicillin-resistant Staphylococcus aureus epidemic clones and toxin gene profiles in Japan: Comparative analysis among pre-epidemic, epidemic and post-epidemic phases

Osaka, S., Okuzumi, K., Koide, S., Tamai, K., Sato, T., Tanimoto, K., Tomita, H., Suzuki, M., Nagano, Y., Shibayama, K., Arakawa, Y. & Nagano, N., 03-2018, In : Journal of Medical Microbiology. 67, 3, p. 392-399 8 p., 000687.

Research output: Contribution to journalArticle

Open Access
4 Citations (Scopus)

High prevalence of blaCTX-M-14 among genetically diverse Escherichia coli recovered from retail raw chicken meat portions in Japan

Hayashi, W., Ohsaki, Y., Taniguchi, Y., Koide, S., Kawamura, K., Suzuki, M., Kimura, K., Wachino, J. I., Nagano, Y., Arakawa, Y. & Nagano, N., 02-11-2018, In : International Journal of Food Microbiology. 284, p. 98-104 7 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

High rates of human fecal carriage of mcr-1-positive multidrug-resistant enterobacteriaceae emerge in China in association with successful plasmid families

Zhong, L. L., Phan, H. T. T., Shen, C., Vihta, K. D., Sheppard, A. E., Huang, X., Zeng, K. J., Li, H. Y., Zhang, X. F., Patil, S., Crook, D. W., Walker, A. S., Xing, Y., Lin, J. L., Feng, L. Q., Doi, Y., Xia, Y., Stoesser, N. & Tian, G. B., 03-2018, In : Clinical Infectious Diseases. 66, 5, p. 676-685 10 p.

Research output: Contribution to journalArticle

24 Citations (Scopus)

Origin of the plasmid-mediated fosfomycin resistance gene fosA3

Ito, R., Pacey, M. P., Mettus, R. T., Sluis-Cremer, N. & Doi, Y., 01-01-2018, In : Journal of Antimicrobial Chemotherapy. 73, 2, p. 373-376 4 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Outcomes of adjunctive therapy with intrathecal or intraventricular administration of colistin for post-neurosurgical meningitis and ventriculitis due to carbapenem-resistant acinetobacter baumannii

Chusri, S., Sakarunchai, I., Kositpantawong, N., Panthuwong, S., Santimaleeworagun, W., Pattharachayakul, S., Singkhamanan, K. & Doi, Y., 04-2018, In : International Journal of Antimicrobial Agents. 51, 4, p. 646-650 5 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Phylogenomics of colistin-susceptible and resistant XDR Acinetobacter baumannii

Mustapha, M. M., Li, B., Pacey, M. P., Mettus, R. T., McElheny, C. L., Marshall, C. W., Ernst, R. K., Cooper, V. S. & Doi, Y., 01-01-2018, In : Journal of Antimicrobial Chemotherapy. 73, 11, p. 2952-2959 8 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Procalcitonin-guided use of antibiotics for lower respiratory tract infection

Huang, D. T., Yealy, D. M., Filbin, M. R., Brown, A. M., Chang, C. C. H., Doi, Y., Donnino, M. W., Fine, J., Fine, M. J., Fischer, M. A., Holst, J. M., Hou, P. C., Kellum, J. A., Khan, F., Kurz, M. C., Lotfipour, S., Lovecchio, F., Peck-Palmer, O. M., Pike, F., Prunty, H. & 6 others, Sherwin, R. L., Southerland, L., Terndrup, T., Weissfeld, L. A., Yabes, J. & Angus, D. C., 19-07-2018, In : New England Journal of Medicine. 379, 3, p. 236-249 14 p.

Research output: Contribution to journalArticle

113 Citations (Scopus)
2017

A prospective observational study of the epidemiology, management, and outcomes of skin and soft tissue infections due to carbapenem-resistant Enterobacteriaceae

For the Antibacterial Resistance Leadership Group, 01-01-2017, In : Open Forum Infectious Diseases. 4, 3, p. 1-7 7 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Carbapenem-Resistant Enterobacteriaceae infections in patients on renal replacement therapy

For the Antibacterial Resistance Leadership Group, 01-01-2017, In : Open Forum Infectious Diseases. 4, 4, p. 1-6 6 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
61 Citations (Scopus)
7 Citations (Scopus)

Effect of appropriate combination therapy on mortality of patients with bloodstream infections due to carbapenemase-producing Enterobacteriaceae (INCREMENT): a retrospective cohort study

REIPI/ESGBIS/INCREMENT Investigators & REIPI/ESGBIS/INCREMENT Investigators, 07-2017, In : The Lancet Infectious Diseases. 17, 7, p. 726-734 9 p.

Research output: Contribution to journalArticle

154 Citations (Scopus)

Emergence of mcr-1 in Raoultella ornithinolytica and Escherichia coli isolates from retail vegetables in China

Luo, J., Yao, X., Lv, L., Doi, Y., Huang, X., Huang, S. & Liu, J. H., 01-01-2017, In : Antimicrobial agents and chemotherapy. 61, 10

Research output: Contribution to journalArticle

25 Citations (Scopus)
3 Citations (Scopus)

High-level fosfomycin resistance in vancomycin-resistant Enterococcus faecium

Guo, Y., Tomich, A. D., McElheny, C. L., Cooper, V. S., Tait-Kamradt, A., Wang, M., Hu, F., Rice, L. B., Sluis-Cremer, N. & Doi, Y., 11-2017, In : Emerging Infectious Diseases. 23, 11, p. 1902-1904 3 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

IncX2 and IncX1-X2 hybrid plasmids coexisting in a FosA6-producing Escherichia coli strain

Guo, Q., Su, J., McElheny, C. L., Stoesser, N., Doi, Y. & Wang, M., 07-2017, In : Antimicrobial agents and chemotherapy. 61, 7, e00536-17.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Inhibition of fosfomycin resistance protein FosA by phosphonoformate (foscarnet) in multidrug-resistant gram-negative pathogens

Ito, R., Tomich, A. D., McElheny, C. L., Mettus, R. T., Sluis-Cremer, N. & Doi, Y., 12-2017, In : Antimicrobial agents and chemotherapy. 61, 12, e01424.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Structural modification of LPS in colistin-resistant, KPC-producing Klebsiella pneumoniae

Leung, L. M., Cooper, V. S., Rasko, D. A., Guo, Q., Pacey, M. P., McElheny, C. L., Mettus, R. T., Yoon, S. H., Goodlett, D. R., Ernst, R. K. & Doi, Y., 01-01-2017, In : Journal of Antimicrobial Chemotherapy. 72, 11, p. 3035-3042 8 p.

Research output: Contribution to journalArticle

17 Citations (Scopus)

Structure and dynamics of FosA-mediated fosfomycin resistance in Klebsiella pneumoniae and Escherichia coli

Klontz, E. H., Tomich, A. D., Günther, S., Lemkul, J. A., Deredge, D., Silverstein, Z., Shaw, J. A. F., McElheny, C., Doi, Y., Wintrode, P. L., MacKerell, A. D., Sluis-Cremer, N. & Sundberg, E. J., 11-2017, In : Antimicrobial agents and chemotherapy. 61, 11, e01572-17.

Research output: Contribution to journalArticle

Open Access
9 Citations (Scopus)