Characterization of an unusual DS-1-like G8P[8] rotavirus strain from Japan in 2017: Evolution of emerging DS-1-like G8P[8] strains through reassortment

  • Hajime Kamiya
  • , Ratana Tacharoenmuang
  • , Tomihiko Ide
  • , Manami Negoro
  • , Takaaki Tanaka
  • , Kazutoyo Asada
  • , Haruna Nakamura
  • , Katsumi Sugiura
  • , Masakazu Umemoto
  • , Haruo Kuroki
  • , Hiroaki Ito
  • , Shigeki Tanaka
  • , Mitsue Ito
  • , Saori Fukuda
  • , Riona Hatazawa
  • , Yuya Hara
  • , Ratigorn Guntapong
  • , Takayuki Murata
  • , Kiyosu Taniguchi
  • , Shigeru Suga
  • Takashi Nakano, Koki Taniguchi, Satoshi Komoto

Research output: Contribution to journalArticlepeer-review

15 Citations (Scopus)

Abstract

The emergence of unusual DS-1-like intergenogroup reassortant rotaviruses with a bovinelike G8 genotype (DS-1-like G8P[8] strains) has been reported in several Asian countries. During the rotavirus surveillance program in Japan in 2017, a DS-1-like G8P[8] strain (RVA/Human-wt/JPN/ SO1162/2017/G8P[8]) was identified in 43 rotavirus-positive stool samples. Strain SO1162 was shown to have a unique genotype constellation, including genes from both genogroup 1 and 2: G8-P[8]-I2-R2- C2-M2-A2-N2-T2-E2-H2. Phylogenetic analysis revealed that the VP1 gene of strain SO1162 appeared to have originated from DS-1-like G1P[8] strains from Thailand and Vietnam, while the remaining 10 genes were closely related to those of previously reported DS-1-like G8P[8] strains. Thus, SO1162 was suggested to be a reassortant strain that acquired the VP1 gene from Southeast Asian DS-1-like G1P[8] strains on the genetic background of co-circulating DS-1-like G8P[8] strains. Our findings provide important insights into the evolutionary dynamics of emerging DS-1-like G8P[8] strains.

Original languageEnglish
Pages (from-to)256-260
Number of pages5
JournalJapanese journal of infectious diseases
Volume72
Issue number4
DOIs
Publication statusPublished - 2019
Externally publishedYes

All Science Journal Classification (ASJC) codes

  • Microbiology (medical)
  • Infectious Diseases

Fingerprint

Dive into the research topics of 'Characterization of an unusual DS-1-like G8P[8] rotavirus strain from Japan in 2017: Evolution of emerging DS-1-like G8P[8] strains through reassortment'. Together they form a unique fingerprint.

Cite this