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Characterization of the STK11 splicing variant as a normal splicing isomer in a patient with Peutz-Jeghers syndrome harboring genomic deletion of the STK11 gene

  • Kenta Masuda
  • , Yusuke Kobayashi
  • , Tokuhiro Kimura
  • , Kiyoko Umene
  • , Kumiko Misu
  • , Hiroyuki Nomura
  • , Akira Hirasawa
  • , Kouji Banno
  • , Kenjiro Kosaki
  • , Daisuke Aoki
  • , Kokichi Sugano

Research output: Contribution to journal › Article › peer-review

Abstract

We report a STK11 splicing variant comprising a 131-bp insertion that is derived from intron 1, which has previously been reported to possess potent pathogenicity the same variant was detected in a Peutz-Jeghers syndrome patient harboring a genomic deletion in the vicinity of exon 1 of the STK11 gene, which indicated that this variant was derived from the wild-type allele. We also found the same variant in other normal subjects. This variant corresponds to the predicted transcript variant of STK11 (XM-011528209), which is derived from the genomic sequence of Chr19 (NT-011295.12). Therefore, we concluded that the splicing variant was not pathogenic.

Original languageEnglish
Article number16002
JournalHuman Genome Variation
Volume3
DOIs
Publication statusPublished - 03-03-2016
Externally publishedYes

All Science Journal Classification (ASJC) codes

  • Biochemistry
  • Molecular Biology
  • Genetics

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