Copy numbers of telomeric repeat sequences of human herpesvirus 6B in clinical isolates

Possibility of mixed infections

Yuri Kato, Masaru Ihira, Mami Umeda, Yuki Higashimoto, Yoshiki Kawamura, Masahiro Ohashi, Junichi Ishii, Tetsushi Yoshikawa

Research output: Contribution to journalArticle

4 Citations (Scopus)

Abstract

In order to determine whether mixed infections of human herpesvirus 6B (HHV-6B) occur in immunocompetent and immunocompromised individuals, we examined the copy numbers of telomeric repeat sequences (TRS) of clinical isolates. In clinical isolates obtained from patients with exanthem subitum caused by primary HHV-6B infection, PCR products with HHV-6B TRS ranging between 400 and 800 bp were amplified. PCR products of various sizes were amplified in four clinical isolates from druginduced hypersensitivity syndrome (DIHS) patients and 15 isolates from hematopoietic stem cell transplant (HSCT) recipients with HHV-6B reactivation. Based on the sequence analysis of the PCR products, the copy numbers of TRS in DIHS and HSCT patients were between 42 and 82 and 22 and>90, respectively. For two of the HSCT recipients, HHV-6B TRS PCR products of different sizes were detected in several isolates from each patient, which suggests mixed HHV-6B infections. In two of the posttransplant HHV-6B encephalitis patients, the sizes of the TRS nested PCR products amplified from the reactivated virus detected in the central nervous system differed from those of the virus detected in initial isolates from peripheral blood mononuclear cells. Taken together, these results suggest that PCR analysis of TRS copy number is a reliable tool for the discrimination of HHV-6B clinical isolates. Additionally, mixed HHV-6B infections occurred in HSCT recipients, and in some cases, compartmentalization of the HHV-6B strains to the central nervous system versus the blood compartment occurred in posttransplant HHV-6B encephalitis patients.

Original languageEnglish
Pages (from-to)419-424
Number of pages6
JournalJournal of clinical microbiology
Volume52
Issue number2
DOIs
Publication statusPublished - 01-02-2014

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Human Herpesvirus 6
Coinfection
Hematopoietic Stem Cells
Herpesviridae Infections
Polymerase Chain Reaction
Transplants
Encephalitis
Hypersensitivity
Central Nervous System
Viruses
Exanthema
Sequence Analysis
Blood Cells

All Science Journal Classification (ASJC) codes

  • Microbiology (medical)

Cite this

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title = "Copy numbers of telomeric repeat sequences of human herpesvirus 6B in clinical isolates: Possibility of mixed infections",
abstract = "In order to determine whether mixed infections of human herpesvirus 6B (HHV-6B) occur in immunocompetent and immunocompromised individuals, we examined the copy numbers of telomeric repeat sequences (TRS) of clinical isolates. In clinical isolates obtained from patients with exanthem subitum caused by primary HHV-6B infection, PCR products with HHV-6B TRS ranging between 400 and 800 bp were amplified. PCR products of various sizes were amplified in four clinical isolates from druginduced hypersensitivity syndrome (DIHS) patients and 15 isolates from hematopoietic stem cell transplant (HSCT) recipients with HHV-6B reactivation. Based on the sequence analysis of the PCR products, the copy numbers of TRS in DIHS and HSCT patients were between 42 and 82 and 22 and>90, respectively. For two of the HSCT recipients, HHV-6B TRS PCR products of different sizes were detected in several isolates from each patient, which suggests mixed HHV-6B infections. In two of the posttransplant HHV-6B encephalitis patients, the sizes of the TRS nested PCR products amplified from the reactivated virus detected in the central nervous system differed from those of the virus detected in initial isolates from peripheral blood mononuclear cells. Taken together, these results suggest that PCR analysis of TRS copy number is a reliable tool for the discrimination of HHV-6B clinical isolates. Additionally, mixed HHV-6B infections occurred in HSCT recipients, and in some cases, compartmentalization of the HHV-6B strains to the central nervous system versus the blood compartment occurred in posttransplant HHV-6B encephalitis patients.",
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Copy numbers of telomeric repeat sequences of human herpesvirus 6B in clinical isolates : Possibility of mixed infections. / Kato, Yuri; Ihira, Masaru; Umeda, Mami; Higashimoto, Yuki; Kawamura, Yoshiki; Ohashi, Masahiro; Ishii, Junichi; Yoshikawa, Tetsushi.

In: Journal of clinical microbiology, Vol. 52, No. 2, 01.02.2014, p. 419-424.

Research output: Contribution to journalArticle

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AU - Kato, Yuri

AU - Ihira, Masaru

AU - Umeda, Mami

AU - Higashimoto, Yuki

AU - Kawamura, Yoshiki

AU - Ohashi, Masahiro

AU - Ishii, Junichi

AU - Yoshikawa, Tetsushi

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