Genomic Characterization of Chromosomal Insertions: Insights into the Mechanisms Underlying Chromothripsis

Takema Kato, Yuya Ouchi, Hidehito Inagaki, Yoshio Makita, Seiji Mizuno, Mitsuharu Kajita, Toshiro Ikeda, Kazuhiro Takeuchi, Hiroki Kurahashi

Research output: Contribution to journalArticle

6 Citations (Scopus)

Abstract

Chromosomal insertions are rare structural rearrangements, and the molecular mechanisms underlying their origin are unknown. In this study, we used whole genome sequencing to analyze breakpoints and junction sequences in 4 patients with chromosomal insertions. Our analysis revealed that none of the 4 cases involved a simple insertion mediated by a 3-chromosomal breakage and rejoining events. The inserted fragments consisted of multiple pieces derived from a localized genomic region, which were shuffled and rejoined in a disorderly fashion with variable copy number alterations. The junctions were blunt ended or with short microhomologies or short microinsertions, suggesting the involvement of nonhomologous end-joining. In one case, analysis of the parental origin of the chromosomes using nucleotide variations within the insertion revealed that maternal chromosomal segments were inserted into the paternal chromosome. This patient also carried both maternal alleles, suggesting the presence of zygotic trisomy. These data indicate that chromosomal shattering may occur in association with trisomy rescue in the early postzygotic stage.

Original languageEnglish
Pages (from-to)1-9
Number of pages9
JournalCytogenetic and Genome Research
Volume153
Issue number1
DOIs
Publication statusPublished - 01-01-2018

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Trisomy
Chromosomes
Mothers
Chromosome Breakage
Nucleotides
Alleles
Genome
Chromothripsis

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Genetics
  • Genetics(clinical)

Cite this

Kato, Takema ; Ouchi, Yuya ; Inagaki, Hidehito ; Makita, Yoshio ; Mizuno, Seiji ; Kajita, Mitsuharu ; Ikeda, Toshiro ; Takeuchi, Kazuhiro ; Kurahashi, Hiroki. / Genomic Characterization of Chromosomal Insertions : Insights into the Mechanisms Underlying Chromothripsis. In: Cytogenetic and Genome Research. 2018 ; Vol. 153, No. 1. pp. 1-9.
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Genomic Characterization of Chromosomal Insertions : Insights into the Mechanisms Underlying Chromothripsis. / Kato, Takema; Ouchi, Yuya; Inagaki, Hidehito; Makita, Yoshio; Mizuno, Seiji; Kajita, Mitsuharu; Ikeda, Toshiro; Takeuchi, Kazuhiro; Kurahashi, Hiroki.

In: Cytogenetic and Genome Research, Vol. 153, No. 1, 01.01.2018, p. 1-9.

Research output: Contribution to journalArticle

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