Identification of the specific interactors of the human lariat RNA debranching enzyme 1 protein

So Masaki, Rei Yoshimoto, Daisuke Kaida, Asuka Hata, Takayuki Satoh, Mutsuhito Ohno, Naoyuki Kataoka

Research output: Contribution to journalArticle

Abstract

In eukaryotes, pre-mRNA splicing is an essential step for gene expression. We have been analyzing post-splicing intron turnover steps in higher eukaryotes. Here, we report protein interaction between human Debranching enzyme 1 (hDbr1) and several factors found in the Intron Large (IL) complex, which is an intermediate complex of the intron degradation pathway. The hDbr1 protein specifically interacts with xeroderma pigmentosum, complementeation group A (XPA)-binding protein 2 (Xab2). We also attempted to identify specific interactors of hDbr1. Co-immunoprecipitation experiments followed by mass spectrometry analysis identified a novel protein as one of the specific interactors of hDbr1. This protein is well conserved among many species and shows the highest similarity to yeast Drn1, so it is designated as human Dbr1 associated ribonuclease 1 (hDrn1). hDrn1 directly interacts with hDbr1 through protein–protein interaction. Furthermore, hDrn1 shuttles between the nucleus and the cytoplasm, as hDbr1 protein does. These findings suggest that hDrn1 has roles in both the nucleus and the cytoplasm, which are highly likely to involve hDbr1.

Original languageEnglish
Pages (from-to)3705-3721
Number of pages17
JournalInternational journal of molecular sciences
Volume16
Issue number2
DOIs
Publication statusPublished - 09-02-2015

Fingerprint

RNA
enzymes
Enzymes
proteins
Proteins
Ribonucleases
eukaryotes
Introns
splicing
cytoplasm
Eukaryota
nuclei
gene expression
yeast
RNA Precursors
Cytoplasm
lariat debranching enzyme
Gene expression
Yeast
Mass spectrometry

All Science Journal Classification (ASJC) codes

  • Catalysis
  • Molecular Biology
  • Spectroscopy
  • Computer Science Applications
  • Physical and Theoretical Chemistry
  • Organic Chemistry
  • Inorganic Chemistry

Cite this

Masaki, So ; Yoshimoto, Rei ; Kaida, Daisuke ; Hata, Asuka ; Satoh, Takayuki ; Ohno, Mutsuhito ; Kataoka, Naoyuki. / Identification of the specific interactors of the human lariat RNA debranching enzyme 1 protein. In: International journal of molecular sciences. 2015 ; Vol. 16, No. 2. pp. 3705-3721.
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Identification of the specific interactors of the human lariat RNA debranching enzyme 1 protein. / Masaki, So; Yoshimoto, Rei; Kaida, Daisuke; Hata, Asuka; Satoh, Takayuki; Ohno, Mutsuhito; Kataoka, Naoyuki.

In: International journal of molecular sciences, Vol. 16, No. 2, 09.02.2015, p. 3705-3721.

Research output: Contribution to journalArticle

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