Rapid discrimination of Acinetobacter baumannii international clone II lineage by pyrosequencing SNP analyses of blaOXA-51-like genes

Mari Matsui; Satowa Suzuki; Masato Suzuki; Yoshichika Arakawa; Keigo Shibayama

doi:10.1016/j.mimet.2013.05.014

Rapid discrimination of Acinetobacter baumannii international clone II lineage by pyrosequencing SNP analyses of bla_OXA-51-like genes

Mari Matsui, Satowa Suzuki, Masato Suzuki, Yoshichika Arakawa, Keigo Shibayama

Research output: Contribution to journal › Article › peer-review

8 Citations (Scopus)

Abstract

We found that Acinetobacter baumannii international clone II generally possesses unique GTA sequence at nucleotide positions 106-108 in the bla_OXA-51-like genes. We exploited this to develop an easy and rapid method for discrimination of international clone II from other A. baumannii by employing pyrosequencing analyses of single nucleotide polymorphisms.

Original language	English
Pages (from-to)	121-124
Number of pages	4
Journal	Journal of Microbiological Methods
Volume	94
Issue number	2
DOIs	https://doi.org/10.1016/j.mimet.2013.05.014
Publication status	Published - 08-2013
Externally published	Yes

All Science Journal Classification (ASJC) codes

Microbiology
Molecular Biology
Microbiology (medical)

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10.1016/j.mimet.2013.05.014

Cite this

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title = "Rapid discrimination of Acinetobacter baumannii international clone II lineage by pyrosequencing SNP analyses of blaOXA-51-like genes",

abstract = "We found that Acinetobacter baumannii international clone II generally possesses unique GTA sequence at nucleotide positions 106-108 in the blaOXA-51-like genes. We exploited this to develop an easy and rapid method for discrimination of international clone II from other A. baumannii by employing pyrosequencing analyses of single nucleotide polymorphisms.",

author = "Mari Matsui and Satowa Suzuki and Masato Suzuki and Yoshichika Arakawa and Keigo Shibayama",

year = "2013",

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AU - Matsui, Mari

AU - Suzuki, Satowa

AU - Suzuki, Masato

AU - Arakawa, Yoshichika

AU - Shibayama, Keigo

PY - 2013/8

Y1 - 2013/8

N2 - We found that Acinetobacter baumannii international clone II generally possesses unique GTA sequence at nucleotide positions 106-108 in the blaOXA-51-like genes. We exploited this to develop an easy and rapid method for discrimination of international clone II from other A. baumannii by employing pyrosequencing analyses of single nucleotide polymorphisms.

AB - We found that Acinetobacter baumannii international clone II generally possesses unique GTA sequence at nucleotide positions 106-108 in the blaOXA-51-like genes. We exploited this to develop an easy and rapid method for discrimination of international clone II from other A. baumannii by employing pyrosequencing analyses of single nucleotide polymorphisms.

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ER -

Rapid discrimination of Acinetobacter baumannii international clone II lineage by pyrosequencing SNP analyses of bla_OXA-51-like genes

Abstract

All Science Journal Classification (ASJC) codes

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