Whole genome sequence of an uncommon G9P[4] species A rotavirus containing DS-1-like (genotype 2) genes in Japan

Tung Phan, Riona Hatazawa, Satoshi Komoto, Shuichi Nishimura, Pattara Khamrin, Ngan Thi Kim Pham, Shoko Okitsu, Takashi Kobayashi, Niwat Maneekarn, Satoshi Hayakawa, Hiroshi Ushijima

Research output: Contribution to journalArticlepeer-review

Abstract

Species A rotaviruses (RVAs) have been recognized as one of the leading causes of acute gastroenteritis in humans worldwide. Here, the complete coding sequences of 11 RNA segments of an uncommon G9P[4] RVA strain, which was detected in feces of a diarrheal child in Japan, were determined by next-generation sequencing technology. Its genomic constellation, VP7-VP4-VP6-VP1-VP2-VP3-NSP1-NSP2-NSP3-NSP4-NSP5, was determined as G9-P[4]-I2-R2-C2-M2-A2-N2-T2-E2-H2. This work reports the complete coding sequences of a G9P[4] RVA strain containing DS-1-like (genotype 2) genes that was isolated in Japan in 2013.

Original languageEnglish
Pages (from-to)1603-1606
Number of pages4
JournalArchives of Virology
Volume167
Issue number7
DOIs
Publication statusPublished - 07-2022

All Science Journal Classification (ASJC) codes

  • Virology

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