Why is the interferon sensitivity-determining region (ISDR) system useful in Japan?

Isao Nakano, Yoshihide Fukuda, Yoshiaki Katano, Satoshi Nakano, Takashi Kumada, Tetsuo Hayakawa

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Abstract

Background/Aims: The amino acid sequence of NS5A2209-2248, named the 'interferon sensitivity-determining region' (ISDR), has been reported to correlate with responsiveness of interferon (IFN) therapy to patients with the hepatitis C virus (HCV) genotype-1b, by several Japanese authors. However, European authors have failed to find this phenomenon, suggesting a difference in HCV-1b isolates between Japan and Europe. Methods: We compared the HCV-1b nucleotide sequences of our Japanese patients and those of other countries quoted from GenBank, using the envelope 1 sequence. Results: A phylogenetic tree analysis revealed two characteristic groups from a geographical viewpoint: one group (NJ group) consists of almost entirely non-Japanese isolates, and the other (J group) of almost entirely Japanese isolates. The isolates other than the NJ and J groups are characterized by their specific nucleotide residue, constructing an individual group (W group). Japanese HCV-1b isolates consist of the J group and W group (approximately 40% and 60%, respectively). Comparative study between the two groups in Japanese patients treated with IFN revealed a strong correlation between ISDR type and IFN responsiveness only in the J group, but not in the W group. Conclusions: These observations convinced us that the existence of the Japan-specific J group is one reason why the ISDR system is useful only in Japan.

Original languageEnglish
Pages (from-to)1014-1022
Number of pages9
JournalJournal of Hepatology
Volume30
Issue number6
DOIs
Publication statusPublished - 06-1999
Externally publishedYes

All Science Journal Classification (ASJC) codes

  • Hepatology

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    Nakano, I., Fukuda, Y., Katano, Y., Nakano, S., Kumada, T., & Hayakawa, T. (1999). Why is the interferon sensitivity-determining region (ISDR) system useful in Japan? Journal of Hepatology, 30(6), 1014-1022. https://doi.org/10.1016/S0168-8278(99)80254-2