研究成果

2020

Biosynthesis of Circular RNA ciRS-7/CDR1as Is Mediated by Mammalian-wide Interspersed Repeats

Yoshimoto, R., Rahimi, K., Hansen, T. B., Kjems, J. & Mayeda, A., 24-07-2020, : : iScience. 23, 7, 101345.

研究成果: Article

公開
2019
公開
1 引用 (Scopus)
6 引用 (Scopus)
2018

HMGA1a induces alternative splicing of estrogen receptor alpha in MCF-7 human breast cancer cells

Ohe, K., Miyajima, S., Abe, I., Tanaka, T., Hamaguchi, Y., Harada, Y., Horita, Y., Beppu, Y., Ito, F., Yamasaki, T., Terai, H., Mori, M., Murata, Y., Tanabe, M., Ashida, K., Kobayashi, K., Enjoji, M., Yanase, T., Harada, N., Utsumi, T. および1人, Mayeda, A., 09-2018, : : Journal of Steroid Biochemistry and Molecular Biology. 182, p. 21-26 6 p.

研究成果: Article

5 引用 (Scopus)

HMGA1a induces alternative splicing of the estrogen receptor-alpha gene by trapping U1 snRNP to an upstream pseudo-5' splice site

Ohe, K., Miyajima, S., Tanaka, T., Hamaguchi, Y., Harada, Y., Horita, Y., Beppu, Y., Ito, F., Yamasaki, T., Terai, H., Mori, M., Murata, Y., Tanabe, M., Abe, I., Ashida, K., Kobayashi, K., Enjoji, M., Nomiyama, T., Yanase, T., Harada, N. および2人, Utsumi, T. & Mayeda, A., 08-06-2018, : : Frontiers in Molecular Biosciences. 5, JUN, 52.

研究成果: Article

2 引用 (Scopus)

Rearrangement of VPS13B, a causative gene of Cohen syndrome, in a case of RUNX1–RUNX1T1 leukemia with t(8;12;21)

Abe, A., Yamamoto, Y., Katsumi, A., Okamoto, A., Tokuda, M., Inaguma, Y., Yamamoto, K., Yanada, M., Kanie, T., Tomita, A., Akatsuka, Y., Okamoto, M., Kameyama, T., Mayeda, A. & Emi, N., 01-08-2018, : : International Journal of Hematology. 108, 2, p. 208-212 5 p.

研究成果: Article

3 引用 (Scopus)
3 引用 (Scopus)
2017
12 引用 (Scopus)

Global analysis of pre-mRNA subcellular localization following splicing inhibition by spliceostatin A

Yoshimoto, R., Kaida, D., Furuno, M., Burroughs, A. M., Noma, S., Suzuki, H., Kawamura, Y., Hayashizaki, Y., Mayeda, A. & Yoshida, M., 01-2017, : : RNA. 23, 1, p. 47-57 11 p.

研究成果: Article

25 引用 (Scopus)
2016

Control of the heat stress-induced alternative splicing of a subset of genes by hnRNP K

Yamamoto, K., Furukawa, M. T., Fukumura, K., Kawamura, A., Yamada, T., Suzuki, H., Hirose, T., Sakamoto, H. & Inoue, K., 01-09-2016, : : Genes to Cells. 21, 9, p. 1006-1014 9 p.

研究成果: Article

12 引用 (Scopus)

Endogenous multiple exon skipping and back-splicing at the DMD mutation hotspot

Suzuki, H., Aoki, Y., Kameyama, T., Saito, T., Masuda, S., Tanihata, J., Nagata, T., Mayeda, A., Takeda, SI. & Tsukahara, T., 13-10-2016, : : International journal of molecular sciences. 17, 10, 1722.

研究成果: Article

22 引用 (Scopus)

ETV6-LPXN fusion transcript generated by t(11;12)(q12.1;p13) in a patient with relapsing acute myeloid leukemia with NUP98-HOXA9

Abe, A., Yamamoto, Y., Iba, S., Kanie, T., Okamoto, A., Tokuda, M., Inaguma, Y., Yanada, M., Morishima, S., Mizuta, S., Akatsuka, Y., Okamoto, M., Kameyama, T., Mayeda, A. & Emi, N., 01-03-2016, : : Genes Chromosomes and Cancer. 55, 3, p. 242-250 9 p.

研究成果: Article

8 引用 (Scopus)

MALAT1 long non-coding RNA in cancer

Yoshimoto, R., Mayeda, A., Yoshida, M. & Nakagawa, S., 01-01-2016, : : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1859, 1, p. 192-199 8 p.

研究成果: Article

119 引用 (Scopus)

Selection pressure on human STR loci and its relevance in repeat expansion disease

Shimada, M. K., Sanbonmatsu, R., Yamaguchi-Kabata, Y., Yamasaki, C., Suzuki, Y., Chakraborty, R., Gojobori, T. & Imanishi, T., 01-10-2016, : : Molecular Genetics and Genomics. 291, 5, p. 1851-1869 19 p.

研究成果: Article

6 引用 (Scopus)
12 引用 (Scopus)
2015
6 引用 (Scopus)

Identification of the specific interactors of the human lariat RNA debranching enzyme 1 protein

Masaki, S., Yoshimoto, R., Kaida, D., Hata, A., Satoh, T., Ohno, M. & Kataoka, N., 09-02-2015, : : International journal of molecular sciences. 16, 2, p. 3705-3721 17 p.

研究成果: Article

NUP214-RAC1 and RAC1-COL12A1 Fusion in Complex Variant Translocations Involving Chromosomes 6, 7 and 9 in an Acute Myeloid Leukemia Case with DEK-NUP214

Abe, A., Yamamoto, Y., Iba, S., Okamoto, A., Tokuda, M., Inaguma, Y., Yanada, M., Morishima, S., Kanie, T., Tsuzuki, M., Akatsuka, Y., Mizuta, S., Okamoto, M., Kameyama, T., Mayeda, A. & Emi, N., 01-12-2015, : : Cytogenetic and Genome Research. 146, 4, p. 279-284 6 p.

研究成果: Article

2014

Identification of a novel component C2ORF3 in the lariat-intron complex: Lack of C2ORF3 interferes with pre-mRNA splicing via intron turnover pathway

Yoshimoto, R., Okawa, K., Yoshida, M., Ohno, M. & Kataoka, N., 01-2014, : : Genes to Cells. 19, 1, p. 78-87 10 p.

研究成果: Article

11 引用 (Scopus)

Splicing inhibition induces gene expression through canonical NF-κB pathway and extracellular signal-related kinase activation

Khan, K., Schneider-Poetsch, T., Ishfaq, M., Ito, A., Yoshimoto, R., Mukaida, N. & Yoshida, M., 18-03-2014, : : FEBS Letters. 588, 6, p. 1053-1057 5 p.

研究成果: Article

4 引用 (Scopus)
2013

HnRNP L and hnRNP LL antagonistically modulate PTB-mediated splicing suppression of CHRNA1 pre-mRNA

Rahman, M. A., Masuda, A., Ohe, K., Ito, M., Hutchinson, D. O., Mayeda, A., Engel, A. G. & Ohno, K., 25-10-2013, : : Scientific reports. 3, 2931.

研究成果: Article

22 引用 (Scopus)

Nested introns in an intron: Evidence of multi-step splicing in a large intron of the human dystrophin pre-mRNA

Suzuki, H., Kameyama, T., Ohe, K., Tsukahara, T. & Mayeda, A., 18-03-2013, : : FEBS Letters. 587, 6, p. 555-561 7 p.

研究成果: Article

19 引用 (Scopus)
2012

Detection of pre-mRNA splicing in vitro by an RNA-templated fluorogenic reaction

Tamura, Y., Furukawa, K., Yoshimoto, R., Kawai, Y., Yoshida, M., Tsuneda, S., Ito, Y. & Abe, H., 01-12-2012, : : Bioorganic and Medicinal Chemistry Letters. 22, 23, p. 7248-7251 4 p.

研究成果: Article

8 引用 (Scopus)

Identification of cis- and trans-acting factors involved in the localization of MALAT-1 noncoding RNA to nuclear speckles

Miyagawa, R., Tano, K., Mizuno, R. I. E., Nakamura, Y. O., Ijiri, K., Rakwal, R., Shibato, J., Masuo, Y., Mayeda, A., Hirose, T. & Akimitsu, N., 01-04-2012, : : RNA. 18, 4, p. 738-751 14 p.

研究成果: Article

125 引用 (Scopus)

In Vitro Splicing Assays

Mayeda, A. & Krainer, A. R., 02-02-2012, Alternative pre-mRNA Splicing: Theory and Protocols. Wiley-VCH, p. 320-329 10 p.

研究成果: Chapter

4 引用 (Scopus)
10 引用 (Scopus)

Prediction of Protein-Destabilizing Polymorphisms by Manual Curation with Protein Structure

Gough, C. A., Homma, K., Yamaguchi-Kabata, Y., Shimada, M. K., Chakraborty, R., Fujii, Y., Iwama, H., Minoshima, S., Sakamoto, S., Sato, Y., Suzuki, Y., Tada-Umezaki, M., Nishikawa, K., Imanishi, T. & Gojobori, T., 26-11-2012, : : PloS one. 7, 11, e50445.

研究成果: Article

3 引用 (Scopus)
19 引用 (Scopus)

SAP155-mediated splicing of FUSE-binding protein-interacting repressor serves as a molecular switch for c-myc gene expression

Matsushita, K., Kajiwara, T., Tamura, M., Satoh, M., Tanaka, N., Tomonaga, T., Matsubara, H., Shimada, H., Yoshimoto, R., Ito, A., Kubo, S., Natsume, T., Levens, D., Yoshida, M. & Nomura, F., 06-2012, : : Molecular Cancer Research. 10, 6, p. 787-799 13 p.

研究成果: Article

16 引用 (Scopus)
2011

Competition between a noncoding exon and introns: Gomafu contains tandem UACUAAC repeats and associates with splicing factor-1

Tsuiji, H., Yoshimoto, R., Hasegawa, Y., Furuno, M., Yoshida, M. & Nakagawa, S., 01-05-2011, : : Genes to Cells. 16, 5, p. 479-490 12 p.

研究成果: Article

93 引用 (Scopus)

Fluorescence detection of intron lariat RNA with reduction-triggered fluorescent probes

Furukawa, K., Abe, H., Tamura, Y., Yoshimoto, R., Yoshida, M., Tsuneda, S. & Ito, Y., 09-12-2011, : : Angewandte Chemie - International Edition. 50, 50, p. 12020-12023 4 p.

研究成果: Article

25 引用 (Scopus)
2010
9 引用 (Scopus)
25 引用 (Scopus)

The expression of HMGA1a is increased in lymphoblastoid cell lines from schizophrenia patients

Morikawa, T., Manabe, T., Ito, Y., Yamada, S., Yoshimi, A., Nagai, T., Ozaki, N. & Mayeda, A., 01-05-2010, : : Neurochemistry International. 56, 6-7, p. 736-739 4 p.

研究成果: Article

9 引用 (Scopus)
2009

Isolation and characterization of post-splicing lariat-intron complexes

Yoshimoto, R., Kataoka, N., Okawa, K. & Ohno, M., 2009, : : Nucleic acids research. 37, 3, p. 891-902 12 p.

研究成果: Article

46 引用 (Scopus)

Skewed matrilineal genetic composition in a small wild chimpanzee community

Shimada, M., Hayakawa, S., Fujita, S., Sugiyama, Y. & Saitou, N., 01-04-2009, : : Folia Primatologica. 80, 1, p. 19-32 14 p.

研究成果: Article

7 引用 (Scopus)

VarySysDB: A human genetic polymorphism database based on all H-InvDB transcripts

Shimada, M. K., Matsumoto, R., Hayakawa, Y., Sanbonmatsu, R., Gough, C., Yamaguchi-Kabata, Y., Yamasaki, C., Imanishi, T. & Gojobori, T., 09-01-2009, : : Nucleic Acids Research. 37, SUPPL. 1, p. D810-D815

研究成果: Article

13 引用 (Scopus)
2008

Distribution and effects of nonsense polymorphisms in human genes

Yamaguchi-Kabata, Y., Shimada, M. K., Hayakawa, Y., Minoshima, S., Chakraborty, R., Gojobori, T. & Imanishi, T., 14-10-2008, : : PloS one. 3, 10, e3393.

研究成果: Article

31 引用 (Scopus)

The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts

Genome Information Integration Project and H-Invitational 2 Consortium, 01-2008, : : Nucleic acids research. 36, SUPPL. 1, p. D793-D799

研究成果: Article

55 引用 (Scopus)
2007

HMGA1a: Sequence-specific RNA-binding factor causing sporadic Alzheimer's disease-linked exon skipping of presenilin-2 pre-mRNA

Manabe, T., Ohe, K., Katayama, T., Matsuzaki, S., Yanagita, T., Okuda, H., Bando, Y., Imaizumi, K., Reeves, R., Tohyama, M. & Mayeda, A., 10-2007, : : Genes to Cells. 12, 10, p. 1179-1191 13 p.

研究成果: Article

23 引用 (Scopus)
2005

Activation of pre-mRNA splicing by human RNPS1 is regulated by CK2 phosphorylation

Trembley, J. H., Tatsumi, S., Sakashita, E., Loyer, P., Slaughter, C. A., Suzuki, H., Endo, H., Kidd, V. J. & Mayeda, A., 02-2005, : : Molecular and Cellular Biology. 25, 4, p. 1446-1457 12 p.

研究成果: Article

27 引用 (Scopus)

Nucleotide sequence comparison of a chromosome rearrangement on human chromosome 12 and the corresponding ape chromosomes

Shimada, M. K., Kim, C. G., Kitano, T., Ferrell, R. E., Kohara, Y. & Saitou, N., 2005, : : Cytogenetic and Genome Research. 108, 1-3, p. 83-90 8 p.

研究成果: Article

17 引用 (Scopus)
2004

Allele frequency distribution of the canine dopamine receptor D4 gene exon III and I in 23 breeds

Ito, H., Nara, H., Inoue-Murayama, M., Shimada, M. K., Koshimura, A., Ueda, Y., Kitagawa, H., Takeuchi, Y., Mori, Y., Murayama, Y., Morita, M., Iwasaki, T., Ôta, K., Tanabe, Y. & Ito, S., 01-07-2004, : : Journal of Veterinary Medical Science. 66, 7, p. 815-820 6 p.

研究成果: Article

58 引用 (Scopus)

Human RNPS1 and Its Associated Factors: A Versatile Alternative Pre-mRNA Splicing Regulator in Vivo

Sakashita, E., Tatsumi, S., Werner, D., Endo, H. & Mayeda, A., 02-2004, : : Molecular and Cellular Biology. 24, 3, p. 1174-1187 14 p.

研究成果: Article

73 引用 (Scopus)
2003

A novel rat orthologue and homologue for the Drosophila crooked neck gene in neural stem cells and their immediate descendants

Amada, N., Tezuka, T., Mayeda, A., Araki, K., Takei, N., Todokoro, K. & Nawa, H., 01-05-2003, : : Journal of Biochemistry. 133, 5, p. 615-623 9 p.

研究成果: Article

6 引用 (Scopus)

Human Immunodeficiency Virus Type 1 hnRNP A/B-Dependent Exonic Splicing Silencer ESSV Antagonizes Binding of U2AF65 to Viral Polypyrimidine Tracts

Domsic, J. K., Wang, Y., Mayeda, A., Krainer, A. R. & Stoltzfus, C. M., 12-2003, : : Molecular and Cellular Biology. 23, 23, p. 8762-8772 11 p.

研究成果: Article

53 引用 (Scopus)

Induced HMGA 1a expression causes aberrant splicing a Presenilin-2 pre-mRNA in sporadic Alzhiemer's disease

Manabe, T., Katayama, T., Sato, N., Gomi, F., Hitomi, J., Yanagita, T., Kudo, T., Honda, A., Mori, Y., Matsuzaki, S., Imaizumi, K., Mayeda, A. & Tohyama, M., 01-06-2003, : : Cell Death and Differentiation. 10, 6, p. 698-708 11 p.

研究成果: Article

52 引用 (Scopus)