Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells

Keisuke Hitachi; Kunihiro Tsuchida

doi:10.1016/j.dib.2019.104172

Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells

Keisuke Hitachi, Kunihiro Tsuchida

難病治療学

研究成果: Article › 査読

2 被引用数 (Scopus)

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Myoparr is a promoter-associated long non-coding RNA (lncRNA) that is expressed from the promoter region of myogenin gene. Myoparr is essential for the proper differentiation of skeletal muscle cells; it accomplishes this by activating the expression of myogenin and myogenic microRNAs (miRNAs). In this study, we provide the RNA-seq data describing the changes in gene expression induced by knockdown of Myoparr, myogenin, and two Myoparr-binding proteins (Ddx17 and hnRNPK) during skeletal muscle differentiation in C2C12 cells. Raw data files were deposited in Sequence Read Archive in DNA Data Bank of Japan (DDBJ) under the accession number DRA005527. These data are related to the research article “Myogenin promoter-associated lncRNA Myoparr is essential for myogenic differentiation” Hitachi et al., 2019.

本文言語	English
論文番号	104172
ジャーナル	Data in Brief
巻	25
DOI	https://doi.org/10.1016/j.dib.2019.104172
出版ステータス	Published - 08-2019

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一般

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10.1016/j.dib.2019.104172

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title = "Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells",

abstract = "Myoparr is a promoter-associated long non-coding RNA (lncRNA) that is expressed from the promoter region of myogenin gene. Myoparr is essential for the proper differentiation of skeletal muscle cells; it accomplishes this by activating the expression of myogenin and myogenic microRNAs (miRNAs). In this study, we provide the RNA-seq data describing the changes in gene expression induced by knockdown of Myoparr, myogenin, and two Myoparr-binding proteins (Ddx17 and hnRNPK) during skeletal muscle differentiation in C2C12 cells. Raw data files were deposited in Sequence Read Archive in DNA Data Bank of Japan (DDBJ) under the accession number DRA005527. These data are related to the research article “Myogenin promoter-associated lncRNA Myoparr is essential for myogenic differentiation” Hitachi et al., 2019.",

author = "Keisuke Hitachi and Kunihiro Tsuchida",

note = "Funding Information: We thank Dr. H. Danno for providing technical advice on bioinformatics analysis. This work was financially supported by JSPS KAKENHI ( 25860151 , 16K08599 , 17K08646 , and 19H03427 ) and Intramural Research Grants ( 26-8 and 29-4 ) for Neurological and Psychiatric Disorders of NCNP. Publisher Copyright: {\textcopyright} 2019 The Author(s)",

year = "2019",

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doi = "10.1016/j.dib.2019.104172",

language = "English",

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AU - Hitachi, Keisuke

AU - Tsuchida, Kunihiro

N1 - Funding Information: We thank Dr. H. Danno for providing technical advice on bioinformatics analysis. This work was financially supported by JSPS KAKENHI ( 25860151 , 16K08599 , 17K08646 , and 19H03427 ) and Intramural Research Grants ( 26-8 and 29-4 ) for Neurological and Psychiatric Disorders of NCNP. Publisher Copyright: © 2019 The Author(s)

PY - 2019/8

Y1 - 2019/8

N2 - Myoparr is a promoter-associated long non-coding RNA (lncRNA) that is expressed from the promoter region of myogenin gene. Myoparr is essential for the proper differentiation of skeletal muscle cells; it accomplishes this by activating the expression of myogenin and myogenic microRNAs (miRNAs). In this study, we provide the RNA-seq data describing the changes in gene expression induced by knockdown of Myoparr, myogenin, and two Myoparr-binding proteins (Ddx17 and hnRNPK) during skeletal muscle differentiation in C2C12 cells. Raw data files were deposited in Sequence Read Archive in DNA Data Bank of Japan (DDBJ) under the accession number DRA005527. These data are related to the research article “Myogenin promoter-associated lncRNA Myoparr is essential for myogenic differentiation” Hitachi et al., 2019.

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Data describing the effects of depletion of Myoparr, myogenin, Ddx17, and hnRNPK in differentiating C2C12 cells

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